発表論文

TOP 発表論文 Papers 2017

研究成果

Papers 2017

  1. Nishimura, Y., Ezawa, R., Ishii, J., Ogino, C., Kondo, A. (2017/01) Affibody-displaying bio-nanocapsules effective in EGFR, typical biomarker, expressed in various cancer cells., Bioorganic & Medicinal Chemistry Letters, 27(2), 336-341

  2. Ghobadi, N., Ogino, C., Yamabe, K., Ohmura, N. (2017/01) Characterizations of the submerged fermentation of Aspergillus oryzae using a Fullzone impeller in a stirred tank bioreactor., Journal of Bioscience and Bioengineering, 123(1), 101-108

  3. Kono, T., Mehrotra, S., Endo, C., Kizu, N., Matsuda, M., Kimura, H., Mizohata, E., Inoue, T., Hasunuma, T., Yokota, A., Matsumura, H., Ashida, H. (2017/01) A RuBisCO-mediated carbon metabolic pathway in methanogenic archaea., Nature Communications, 8 : 14007

  4. Ho, SH., Chen, YD., Chang, CY., Lai, YY., Chen, CY., Kondo, A., Ren, NQ., Chang, JS. (2017/01) Feasibility of CO2 mitigation and carbohydrate production by microalga Scenedesmus obliquus CNW-N used for bioethanol fermentation under outdoor conditions : Effects of seasonal changes. Biotechnology for Biofuels, 10 : 27

  5. Qing, X., Yan, HM., Ni, ZY., Vavricka, CJ., Zhang, ML., Shi, QW., Gu, YC., Kiyota, H. (2017/01) Chemical and pharmacological research on the plants from genus Ajuga, Heterocyclic Communications, 23(4), 245

  6. Takenaka, M., Okumura, Y., Amino, T., Miyachi, Y., Ogino, C., Kondo, A. (2017/02) DNA-duplex linker for AFM-SELEX of DNA aptamer against human serum albumin. Bioorganic and Medicinal Chemistry Letters, 27(4), 954-957

  7. Zhang. F., Wang, HW., Tominaga, K., Hayashi, M., Hasunuma, T., Kondo, A. (2017/02) Application of THz vibrational spectroscopy to molecular characterization and the theoretical fundamentals: an illustration using saccharide molecules., Chemistry - An Asian Journal, 12(3), 324-331

  8. Hsu, H., Hasunuma, T., Araki, M., Yoshida, T., Hori, Y., Murata, M., Kondo, A. (2017/02) Application of LC-MS/MS analysis for time-lapse amino acid metabolomics in CHO cell culture., Shimadzu Journal, 5 (1), 17-21

  9. Okano, K., Hama, S., Kihara, M., Noda, H., Tanaka, T., Kondo, A. (2017/03) Production of optically pure D-lactic acid from brown rice using metabolically engineered Lactobacillus plantarum., Applied Microbiology and Biotechnology, 101(5), 1869-1875

  10. Takenaka, M., Kobayashi, T., Inokuma, K., Hasunuma, T., Maruyama, T., Ogino, C., Kondo, A. (2017/03) Mapping of endoglucanases displayed on yeast cell surface using atomic force microscopy., Colloids and Surfaces B: Biointerfaces, 151, 134-142

  11. Bin Mohamed Suffian, I. F., Wang, J. T-W., Hodgins, N. O., Klippstein, R., Garcia-Maya, M., Brown, P., Nishimura, Y., Heidari, H., Bals, S., Sosabowski, J., Ogino, C., Kondo, A., Al-Jamal, K. T. (2017/03) Engineering hepatitis B virus core particles for targeting HER2 receptors in vitro and in vivo., Biomaterials, 120, 126-138

  12. Bin Mohamed Suffian, I. F., Mitla, GM., Paul, B., Bui, T., Nishimura, Y., Amir, R. B. M. J. P., Ogino, C., Kondo, A., Al-Jamal, K.T. (2017/03) Yield optimisation of hepatitis B virus core particles in E. coli expression system for drug delivery applications. Scientific Reports, 7: 43160

  13. Hsu, H., Araki, M., Mochizuki, M., Hori, Y., Murata, M., Kahar, P., Yoshida, T., Hasunuma, T., Kondo, A. (2017/03) A systematic approach to time-series metabolite profiling and RNA-seq analysis of Chinese hamster ovary cell culture, Scientific Reports, 7:43518

  14. Kuribayashi, A., Fujii, S., Masanari, M., Yamanaka, M., Wakai, S., Sambongi, Y. (2017/03) Difference in NaCl tolerance of membrane-bound 5’-nucleotidases purified from deep-sea and brackish water Shewanella species. Extremophiles, 21(2), 357-368

  15. Kobayashi, J., Sasaki, D., Hara, K.Y., Hasunuma, T., Kondo, A. (2017/03) Enzymatic improvement of mitochondrial thiol oxidase Erv1 for oxidized glutathione fermentation by Saccharomyces cerevisiae, Microbial Cell Factories, 16:44

  16. Nagarajan, D., Lee, DJ., Kondo, A., Chang, JS. (Review) (2017/03) Recent insights into biohydrogen production by microalgae - from biophotolysis to dark fermentation. Bioresource Technology, 227, 373-387

  17. Amoah, J., Quayson, E., Hama, S., Yoshida, A., Hasunuma, T., Ogino, C., Kondo, A. (2017/03) Simultaneous conversion of free fatty acids and triglycerides to biodiesel by immobilized Aspergillus oryzae expressing Fusarium heterosporum lipase., Biotechnology Journal, 12(3), 1600400

  18. Fujii, S., Oki, H., Kawahara, K., Yamane, S., Yamanaka, M., Maruno, T., Kobayashi, Y., Masanari, M., Wakai, S., Nishihara, H., Ohkubo, T., Sambongi, Y. (2017/04) Structural and functional insights into thermally stable cytochrome c' from a thermophile. Protein Science., 26, 737-748

  19. Ho, SH., Nakanishi, A., Kato, Y., Yamasaki, H., Chang, JS., Misawa, N., Hirose, Y., Minagawa, J., Hasunuma, T.*, Kondo, A. (2017/04) Dynamic metabolic profiling together with transcription analysis reveals salinity-induced starch-to-lipid biosynthesis in alga Chlamydomonas sp. JSC4, Scientific Reports, 4;7: 45471

  20. Shibuya, M., Yasukawa, M., Sasaki, K., Tanaka, Y., Takahashi, T., Kondo, A., Matsuyama, H. (2017/05) Up-concentration of sugars in pretreated-rice straw by an osmotic pressure-driven method. Biochemical Engineering Journal, 121, 13-16

  21. Wakai, S., Abe, A., Fujii, S., Nakasone, K., Sambongi, Y. (2017/05) Pyrophosphate hydrolysis in the extremely halophilic archaeon Haloarcula japonica is catalyzed by a single enzyme with a broad ionic strength range. Extremophiles, 21: 471-477

  22. Eguchi, Y., Kato, T., Tanaka, T., Maruyama, T. (2017/05) A DNA-gold nanoparticle hybrid hydrogel network prepared by enzymatic reaction. Chemical Communications, 53, 5802-5805

  23. Yamada, R., Nakashima, K., Asai-Nakashima, N., Tokuhara, W., Ishida, N., Katahira, S., Kamiya, N., Ogino, C., Kondo, A. (2017/05) Direct ethanol production from ionic liquid-pretreated lignocellulosic biomass by cellulase-displaying yeasts., Applied Biochemistry and Biotechnology, 182(1), 229–237

  24. Shimatani, Z., Kashojiya, S., Takayama, M., Terada, R., Arazoe, T., Ishii, H., Teramura, H., Yamamoto, T., Komatsu, H., Miura, K., Ezura, H., Nishida, K., Ariizumi, T., Kondo, A. (2017/05) Targeted base editing in rice and tomato using a CRISPR-Cas9 cytidine deaminase fusion, Nature Biotechnology, 35(5), 441-443

  25. Fukutani, Y., Ishii, J., Kondo, A., Ozawa, T., Matsunami, H., Yohda, M. (2017/06) Split luciferase complementation assay for the analysis of G protein-coupled receptor ligand response in Saccharomyces cerevisiae. Biotechnology and Bioengineering, 114(6): 1354-1361

  26. Liu, Z., Inokuma, K., Ho, SH., den Haan, R., van Zyl, W.H., Hasunuma, T., Kondo, A. (2017/06) Improvement of ethanol production from crystalline cellulose via optimizing cellulase ratios in cellulolytic Saccharomyces cerevisiae. Biotechnology and Bioengineering, 114(6), 1201-1207

  27. Ryo, S., Ishii, J., Matsuno, T., Nakamura, Y., Matsubara, D., Tominaga, M., Kondo, A. (2017/06) Positive feedback genetic circuit incorporating a constitutively active mutant Gal3 into yeast GAL induction system., ACS Synthetic Biology, 6(6), 928-935

  28. Arazoe, T., Nishida, K., Kondo, A. (2017/06) Targeted nucleotide substitution in mammalian cell by Target-AID, Bio-protocol, 7: 11

  29. Shibuya, M., Sasaki, K., Tanaka, Y., Yasukawa, M., Takahashi, T., Kondo, A., Matsuyama, H. (2017/07) Development of combined nanofiltration and forward osmosis process for production of ethanol from pretreated rice straw. Bioresource Technology, 235, 405-410

  30. Kobayashi, S., Fujii, S., Koga, A., Wakai, S., Matsubayasi, N., Sambongi, Y. (2017/07) Pseudomonas aeruginosa cytochrome c551 denaturation by five systematic urea derivatives that differ in the alkyl chain length. Bioscience, Biotechnology, and Biochemistry., 81: 1274-1278

  31. Sasaki, K., Sasaki, D., Okai, N., Tanaka, K., Nomoto, R., Fukuda, I., Yoshida, K., Kondo, A., Osawa, R. (2017/07) Taurine does not affect the composition, diversity, or metabolism of human colonic microbiota simulated in a single-batch fermentation system, PLOS ONE, 12(7), e0180991

  32. Kawaguchi, H., Katsuyama, Y., Danyao, D., P. Kahar, Nakamura-Tsuruta, S., Teramura, H., Wakai, K., Yoshihara K., Minami, H., Ogino, C., Ohnishi, Y., Kondo, A. (2017/07) Caffeic acid production by simultaneous saccharification and fermentation of kraft pulp using recombinant Escherichia coli, Appl Microbiol Biotechnoliol, 101(13), 5279–5290

  33. Teramura, H., Sasaki, K., Kawaguchi, H., Matsuda, F., Kikuchi, J., Shirai, T., Sazuka, T., Yamasaki, Y., Takumi, S., Ogino, C., Kondo, A. (2017/08) Differences in glucose yield of residues from among varieties of rice, wheat, and sorghum after dilute acid pretreatment. Bioscience Biotechnology and Biochemistry, 81(8), 1650-1656

  34. Osada, T., Maeda, M., Tanabe, C., Furuta, K., Vavricka, CJ., Sasaki, E., Okano, M., Kimura, Y. (2017/08) Glycoform of a newly identified pollen allergen, Cha o 3, from Chamaecyparis obtusa (Japanese cypress, Hinoki). Carbohydrate Research, 448, 18-23

  35. Sasaki, K., Tsuge, Y., Kawaguchi, H., Yasukawa, M., Sasaki, D., Sazuka, T., Kamio, E., Ogino, C., Matsuyama, H., Kondo, A. (2017/08) Sucrose purification and repeated ethanol production from sugars remaining in sweet sorghum juice subjected to a membrane separation process, Applied Microbiology and Biotechnology, 101(15): 6007-6014

  36. Noda, S., Kondo, A. (Review) (2017/08) Recent advances in microbial production of aromatic chemicals and derivatives, Trends in Biotechnology, 35(8), 785-796

  37. Ozaki, A., Konishi, R., Otomo, C., Kishida, M., Takayama, S., Matsumoto, T., Tanaka, T., Kondo, A. (2017/08) Metabolic engineering of Schizosaccharomyces pombe via CRISPR-Cas9 genome editing for lactic acid production from glucose and cellobiose. Metabolic Engineering Communications, 5, 60-67

  38. Fukuda, N., Kaishima, M., Ishii, J., Honda, S. (2017/08) Positive detection of GPCR antagonists using a system for inverted expression of a fluorescent reporter gene. ACS Synthetic Biology, 6(8), 1554-1562

  39. Vavricka, CJ., Muto, C., Hasunuma, T., Kimura, Y., Araki, M., Wu, Y., Gao, GF., Ohrui, H., Izumi, M., Kiyota, H. (2017/08) Synthesis of sulfo-sialic acid analogues: potent neuraminidase inhibitors in regards to anomeric functionality, Scientific Reports, 7(1): 8239

  40. Nambu-Nishida, Y., Nishida, K., Hasunuma, T., Kondo, A. (2017/08) Development of a comprehensive set of tools for genome engineering in a cold- and thermo-tolerant Kluyveromyces marxianus yeast strain, Scientific Reports, 7(1): 8993

  41. Wu, YB., Wang, YZ., Ni, ZY., Qing, X., Shi, QW., Sauriol, F., Vavricka, CJ., Gu, YC., Kiyota, H. (2017/09) Xylomexicanins I and J: limonoids with unusual B/C rings from xylocarpus granatum. Journal of Natural Products, 80(9), 2547-2550

  42. Ueno, Y., Aikawa, S., Niwa, K., Abe, T., Murakami, A., Kondo, A., Akimoto, S. (2017/09) Variety in excitation energy transfer processes from phycobilisomes to photosystems ⅠandⅡ, Photosynthesis Research, 133(1-3), 235-243

  43. Onishi, A., Aikawa, S., Kondo, A., Akimoto, S. (2017/09) Energy transfer in Anabaena variabilis Filaments under nitrogen-depleted and nitrogen-enriched conditions studied by time-resolved fluorescence, Photosynthesis research, 133(1-3), 317-326

  44. Morita, K., Nomura, Y., Ishii, J., Matsuda, F., Kondo, A., Shimizu, H. (2017/09) Heterologous expression of bacterial phosphoenol pyruvate carboxylase and Entner-Doudoroff pathway in Saccharomyces cerevisiae for improvement of isobutanol production, Journal of Bioscience and Bioengineering, 124(3), 263-270

  45. Mitsunobu, H., Teramoto, J., Nishida, K., Kondo, A. (Review)(2017/10) Beyond native Cas9: manipulating genomic information and function, Trends in Biotechnology, 35(10), 983-996

  46. Mert, MJ., Rose, SH., la Grange, DC., Bamba, T., Hasunuma, T., Kondo, A., van Zyl, WH. (2017/10) Quantitative metabolomics of a xylose‑utilizing Saccharomyces cerevisiae strain expressing the Bacteroides thetaiotaomicron xylose isomerase on glucose and xylose, Journal of Industrial Microbiology and Biotechnology, 44(10), 1459-1470

  47. Morita, R., Teramura, H., Ogino, C., Kondo, A., Fukayama, H. (2017/10) Overexpression of CO2-responsive CCT protein, a key regulator of starch synthesis strikingly increases the glucose yield from rice straw for bioethanol production, Plant Production Science, 20(4), 441-447

  48. Noda, S., Shirai, T., Mori, Y., Oyama, S., Kondo, A. (2017/10) Engineering a synthetic pathway for maleate in Escherichia coli, Nature Communications, 8(1): 1153

  49. Osumi, K., Matsuda, S., Fujimura, N., Matsubara, K., Kitago, M., Itano, O., Ogino, C., Shimizu, N., Obara, H., Kitagawa, Y. (2017/11) Acceleration of wound healing by ultrasound activation of TiO2 in Escherichia coli-infected wounds in mice., Journal of Biomedical Materials Research Part B: Applied Biomaterials, 105(8), 2344-2351

  50. Takenaka, M., Amino, T., Miyachi, Y., Ogino, C., Kondo, A. (2017/11) Bear-trap sensing of somatostatin via split aptamers and atomic force microscopy, Sensors & Actuators: B. Chemical, 252, 600-605

  51. Takenaka, M., Amino, T., Miyachi, Y., Ogino, C., Kondo, A. (2017/11) Screening and evaluation of aptamers against somatostatin, and sandwich-like monitoring of somatostatin based on atomic force microscopy, Sensors & Actuators: B. Chemical, 252, 813-821

  52. Hara, Y. K., Kobayashi, J., Yamada, R., Sasaki, D., Kuriya, Y., Hirono-Hara, Y., Ishii, J., Araki, M., Kondo, A. (2017/11) Transporter Engineering in Biomass Utilization by Yeast, FEMS Yeast Research, 17(7), fox061

  53. N. Rahmani, Kashiwagi, N., Lee, J., Niimi-Nakamura, S., Matsumoto, H., P. Kahar, Lisdiyanti, P., Yopi, Y., Prasetya, B., Ogino, C., Kondo, A. (2017/12) Mannan endo-1,4-β-mannosidase from Kitasatospora sp. isolated in Indonesia and its potential for production of mannooligosaccharides from mannan polymers, AMB Express, 7(1): 100

  54. Okai, N., Masuda, T., Takeshima, Y., Tanaka, K., Yoshida, K., Miyamoto, M., Ogino, C., Kondo, A. (2017/12) Biotransformation of ferulic acid to protocatechuic acid by Corynebacterium glutamicum ATCC 21420 engineered to express vanillate O-demethylase, AMB Express, 7(1): 130

  55. Wakai, S., Arazoe, T., Ogino, C., Kondo, A. (Review)(2017/12) Future insights in fungal metabolic engineering. Bioresource Technology, 245, 1314-1326

  56. Matsumoto, T., Tanaka, T., Kondo, A. (Review)(2017/12) Engineering metabolic pathways in Escherichia coli for constructing a “microbial chassis” for biochemical production. Bioresource Technology, 245, 1362-1368

  57. A. Prima, Hara, Y. K., A. C. Djohan, Kashiwagi, N., P. Kahar, Ishii, J., Nakayama, H., Okazaki, F., B. Prasetya, Kondo, A., Yopi, Ogino, C. (2017/12) Glutathione production from mannan-based bioresource by mannanase/mannosidase expressing Saccharomyces cerevisiae, Bioresource Technology, 245, 1400-1406

  58. Amoah, J., Ishizue, N., Ishizaki, M., Yasuda, M., Takahashi, K., Ninomiya, K., Yamada, R., Kondo, A., Ogino, C. (2017/12) Development and evaluation of consolidated bioprocessing yeast for ethanol production from ionic liquid-pretreated bagasse, Bioresource Technology, 245, 1413-1420

  59. P. Kahar, E. I. Riyanti, Otsuka, H., Matsumoto, H., Kihira, C., Ogino, C., Kondo, A. (2017/12) Challenges of non-flocculating Saccharomyces cerevisiae haploid strain against inhibitory chemical complex for ethanol production, Bioresource Technology, 245, 1436-1446

  60. Khatun, MM., Yu, X., Kondo, A., Bai, F., Zhao, X. (2017/12) Improved ethanol production at high temperature by consolidated bioprocessing using Saccharomyces cerevisiae strain engineered with artificial zinc finger protein, Bioresource Technology, 245, 1447-1454

  61. Kato, Y., Ho, SH., Vavricka, CJ., Chang, JS., Hasunuma, T., Kondo, A. (2017/12) Evolutionary engineering of salt-resistant Chlamydomonas sp. strains reveals salinity stress-activated starch-to-lipid biosynthesis switching, Bioresource Technology, 245, 1484-1490

  62. Kashiwagi, N., Ogino, C., Kondo, A. (Review)(2017/12) Production of chemicals and proteins using biomass-derived substrates from a Streptomyces host, Bioresource Technology, 245, 1655-1663

  63. Kawaguchi, H., Ogino, C., Kondo, A. (Review)(2017/12) Microbial conversion of biomass into bio-based polymers, Bioresource Technology, 245, 1664-1673

  64. Imao, K., Konishi, R., Kishida, M., Hirata, Y., Segawa, S., Adachi, N., Matsuura, R., Tsuge, Y., Matsumoto, T., Tanaka T., Kondo, A. (2017/12) 1,5-Diaminopentane production from xylooligosaccharides using metabolically engineered Corynebacterium glutamicum displaying beta-xylosidase on the cell surface. Bioresource Technology, 245, 1684-1691

  65. Wang, Y., Ho, SH., Yen, HW., Nagarajan, D., Ren, NQ., Li, S., Hu, Z., Lee, DJ., Kondo, A., Chang, JS. (Review)(2017/12) Current advances on fermentative biobutanol production using third generation feedstock, Biotechnology Advances, 35(8), 1049-1059

  66. Onodera, K., Hama, S., Yoshida, Y., Noda, H., Kondo, A. (2017/12) Development of fed-batch process for high-yielding β-glucosidase displayed on cell surface of industrial yeast Saccharomyces cerevisiae, Biochemical Engineering Journal, 128, 195-200

  67. J. Amoah, Ho, SH., Hama, S., Yoshida, A., Nakanishi, A., Hasunuma, T., Ogino, C., Kondo, A. (2017/12) Conversion of Chlamydomonas sp. JSC4 lipids to biodiesel using Fusarium heterosporum lipase-expressing Aspergillus oryzae whole-cell as biocatalyst, Algal Research, 28, 16-23

  68. Inokuma, K., Iwamoto, R., Bamba, T., Hasunuma, T., Kondo, A. (2017/12) Improvement of xylose fermentation ability under heat and acid co-stress in Saccharomyces cerevisiae using genome shuffling technique, Frontiers in Bioengineering and Biotechnology, 5, 81

  69. Yoshida, Y., Kuroiwa, H., Shimada, T., Yoshida, M., Ohnuma, M., Fujiwara, T., Imoto, Y., Yagisawa, F., Nishida, K., Hirooka, S., Misumi, O., Mogi, Y., Akakabe, Y., Matsushita, K., Kuroiwa, T. (2017/12) Glycosyltransferase MDR1 assembles a dividing ring for mitochondrial proliferation comprising polyglucan nanofilaments, Proceedings of the National Academy of Sciences of the United States of America, 114(50), 13284-13289

総説・解説

  1. 岡野憲司, 濵真司, 田中勉, 野田秀夫, 近藤昭彦, 未利用バイオマスからのD-乳酸生産に向けた乳酸菌の代謝工学研究, JATAFFジャーナル, Vol.5, No.3, 33-37 (2017/03)

  2. 川口秀夫, 近藤昭彦, リグノセルロース系バイオマスからのバイオモノマー発酵生産, ケミカルエンジニヤリング，Vol.62, No.3, 13-20 (2017/03)

  3. 中村泰之, 伊藤洋一郎, 梅津光央, 石井純, 近藤昭彦, 低分子抗体医薬の開発展望, バイオインダストリー, Vol.34, No.6, 54-62 (2017/06)

  4. 西田敬二, 島谷善平, 近藤昭彦, デアミナーゼを用いたゲノム編集, 植物の生長調節, 52(1), 15-18 (2017/06)

  5. 佐々木建吾, 星奈美子, 16S rRNA遺伝子から見る腸内細菌叢の魅力, 生物工学会誌, 第95巻, 第7号, 397-400 (2017/07)

  6. 近藤昭彦, バイオテクノロジー革新によるバイオプラスチック研究開発の加速, バイオプラジャーナル, No.65, 巻頭 (2017/07)

  7. 近藤昭彦, バイオリファイナリー技術の最近の進歩, アグリバイオ, 11月号, vol.1(12), 総論（2017/11）

  8. 荻野千秋, 農業残さを用いたバイオリファイナリー, アグリバイオ, 11月号, vol.1(12), 19-23（2017/11）

  9. 蓮沼誠久, バイオリファイナリー実現を加速する先端バイオ技術と情報技術の融合, アグリバイオ, 11月号, vol.1(12), 24-29（2017/11）

  10. 石田亘広, 神谷典穂, 荻野千秋, 大西徹, Ionic Liquid-based Consolidated Bioprocessing (i-CBP) for Cellulosic Ethanol Production イオン液体を利用したエタノール生産プロセス, R&D Review of Toyota CRDL, 48巻4号, 特集 低炭素社会を目指した内燃機関の挑戦, 55-64 (2017/12)

  11. 西村勇哉，森田健太，鈴木貴弘，荻野千秋，近藤昭彦，無機とバイオの融合ナノ粒子によるがん治療戦略，粉砕，No.60, 13-19（2017）

著書

  1. Tsuge, Y., Kondo, A., Production of platform chemicals from sustainable resources: Production of amino acids(L-glutamic acid and L-lysine) from biomass, Feng Z (Ed) Springer, 437-455 (2017)