発表論文

TOP 発表論文 Papers 2013

研究成果

Papers 2013

  1. Adachi, D., Koda, R., Hama, S., Yamada, R., Nakashima, K., Ogino, C., Kondo, A. (2013) An integrative process model of enzymatic biodiesel production through ethanol fermentation of brown rice followed by lipase-catalyzed ethanolysis in a water-containing system., Enzyme and Microbial Technology, 52, 118-122

  2. Song,Y., Matsumoto, K., Tanaka, T., Kondo, A. Taguchi, S. (2013) Single-step production of polyhydroxybutyrate from starch by using α-amylase cell-surface displaying system of Corynebacterium glutamicum., Journal of Bioscience and Bioengineering, 115(1), 12-14

  3. Ismail, K.S.K., Sakamoto, T., Hatanaka, H., Hasunuma, T., Kondo, A. (2013) Gene expression cross-profiling in genetically modified industrial Saccharomyces cerevisiae strains during high-temperature ethanol production from xylose., Journal of Biotechnology, 163, 50-60

  4. Sasaki, K., Matsuda, F., Hasunuma, T., Ogino, C., Urairi, M., Yoshida, K., Kondo, A. (2013) Ability of a perfluoropolymer membrane to tolerate by-products of ethanol fermentation broth from dilute acid-pretreated rice straw., Biocehmical Engineering Journal, 70, 135-139

  5. Honjo, T,. Hoe, K., Tabayashi, S., Tanaka, T., Shimada, J., Goto, M., Matsuyama, H., Maruyama, T. (2013) Preparation of afinity membranes using thermally induced phase separation for one-step purification of recombinant proteins., Analytical Biochemistry, 434, 269-274

  6. Ninomiya, K., Soda, H., Ogino, C., Takahashi, K., Shimizu, N. (2013) Effect of ionic liquid weight ratio on pretreatment of bamboo powder prior to enzymatic saccharification., Bioresource Technology, 128, 188-192

  7. Oh, BR., Hong, WK., Heo, SY., Luo, LH., Kondo, A., Seo, JW., Kim CH. (2013) The production of 1,3-propanediol from mixtures of glycerol and glucose by a Klebsiella pneumoniae mutant deficient in carbon catabolite repression., Bioresource Technology, 130, 719-724

  8. Yoshimoto, N., Kida, A., Jie, X., Kurokawa, M., Iijima, M., Niimi, T., Maturana, A.D., Nikaido, I., Ueda, H.R., Tatematsu, K., Tanizawa, K., Kondo, A., Fujii, I., Kuroda, S. (2013) An automated system for high-throughput single cell-based breeding., Scientific Reports, 3, 1191

  9. Hara, K. Y., Wada, T., Kino, K., Asahi, T., Sawamura, N. (2013) Construction of photoenergetic mitochondria in cultured mammalian cells., Scientific Reports, 3, 1635

  10. Suga, H., Matsuda, F., Hasunuma, T., Ishii, J., Kondo, A. (2013) Implementation of a transhydrogenase-like shunt to counter redox imbalance during xylose fermentation in Saccharomyces cerevisiae., Applied Microbiology and Biotechnology, 97(4), 1669-1678

  11. Matano, Y., Hasunuma,T., Kondo, A. (2013) Simultaneous improvement of saccharification and ethanol production from crystalline cellulose by alleviation of irreversible adsorption of cellulase with a cell surface-engineered yeast strain., Applied Microbiology and Biotechnology, 97(5), 2231-2237

  12. Ishii, J., Yoshimura, K., Hasunuma, T., Kondo, A., (2013) Reduction of furan derivatives by overexpressing NADH-dependent Adh1 improves ethanol fermentation using xylose as sole carbon source with Saccharomyces cerevisiae harboring XR-XDH pathway., Applied Microbiology and Biotechnology, 97(6), 2597-2607

  13. Suzuki, H., Okazaki, F., Kondo, A., Yoshida, K. (2013) Genome mining and motif modifications of glycoside hydrolase family 1 members encoded by Geobacillus kaustophilus HTA426 provide thermostable 6-phospho-β-glycosidase and β-fucosidase., Applied Microbiology and Biotechnology, 97(7), 2929-2938

  14. Shirai, T., Matsuda, F., Okamoto, M., Kondo, A. (2013) Evaluation of control mechanisms for Saccharomyces cerevisiae central metabolic reactions using metabolome data of eight single-gene deletion mutants., Applied Microbiology and Biotechnology, 97(8), 3569-3577

  15. Kondo, A., Ishii, J., Hara, K.Y., Hasunuma, T., Matsuda, F. (Review) (2013) Development of microbial cell factories for bio-refinery through synthetic bioengineering., Journal of Biotechnololgy, 163(2), 204-216

  16. Nishimura, Y., Mimura, W., Suffian, IMF, Amino, T., Ishii, J., Ogino, C., Kondo, A. (2013) Granting specificity for breast cancer cells using a Hepatitis B core particle with a HER2-targeted affibody molecule., Journal of Biochemistry, 153(3), 251-256

  17. Srivastava, S.K., Yamada, R., Ogino, C., Kondo, A. (2013) Biogenic synthesis and characterization of gold nanoparticles by Escherichia coli K12 and its heterogeneous catalysis in degradation of 4-nitrophenol., Nanoscale Research Letter., 8(1), 70

  18. Nishimura, Y., Takeda, K., Ishii, J., Ogino, C., Kondo, A. (2013) An affinity chromatography method used to purify His-tag-displaying bio-nanocapsules., Journal of Virological Methods, 189(2), 393-396

  19. Uju, Nakamoto, A., Shoda, Y., Goto, M., Tokuhara, W., Noritake, Y., Katahira, S., Ishida, N., Ogino, C., Kamiya, N. (2013) Low melting point pyridinium ionic liquid pretreatment for enhancing enzymatic saccharification of cellulosic biomass., Bioresource Technology, 135, 103-108

  20. Ho, S.H., Huang, S.W., Chen, C.Y., Hasunuma, T., Kondo, A. (2013) Characterization and optimization of carbohydrate production from an indigenous microalga Chlorella vulgaris FSP-E., Bioresource Technology, 135, 157-165

  21. Ho, S. H., Huang, S. W., Chen, C. Y., Hasunuma, T., Kondo, A., Chang, J. S. (2013) Bioethanol production, using carbohydrate-rich microalgae biomass as feedstock., Bioresource Technology, 135, 191-198

  22. Hama, S., Kondo, A. (Review) (2013) Enzymatic biodiesel production: An overview of potential feedstocks and process development., Bioresourse Technology, 135, 386-395

  23. Matano, Y., Hasunuma, T., Kondo, A. (2013) Cell recycle batch fermentation of high-solid lignocellulose using a recombinant cellulase-displaying yeast strain for high yield ethanol production in consolidated bioprocessing., Bioresourse Technology,
    135    , 403-409

  24. Adachi, D., Hama, S., Nakashima, K., Bogaki, T., Ogino, C., Kondo, A. (2013) Production of biodiesel from plant oil hydrolysates using an Aspergillus oryzae whole-cell biocatalyst highly expressing Candida antarctica lipase B., Bioresourse Technology, 135, 410-416

  25. Hama, S., Yoshida A., Tamadani, N., Noda, H., Kondo, A. (2013) Enzymatic production of biodiesel from waste cooking oil in a packed-bed reactor: An engineering approach to separation of hydrophilic impurities., Bioresourse Technology, 135, 417-421

  26. Hasunuma, T., Okazaki, F., Okai, N., Hara, K.Y., Ishii, J., Kondo, A. (Review) (2013) A review of enzymes and microbes for lignocellulosic biorefinery and the possibility of their application to consolidated bioprocessing technology., Bioresourse Technology , 135, 513-522

  27. Adachi, D., Koh, FH., Hama, S., Ogino, C., Kondo, A. (2013) A robust whole-cell biocatalyst that introduces a thermo- and solvent-tolerant lipase into Aspergillus oryzae cells: Characterization and application to enzymatic biodiesel production., Enzyme and Microbial Technology, 52, 331-335

  28. Ninomiya, K., Yamada, R., Matsumoto, M., Fukiya, S., Katayama, T., Ogino, C., Shimizu, N. (2013) Image analyzing method to evaluate in situ bioluminescence from an obligate anaerobe cultivated under various dissolved oxygen concentrations., Journal of Bioscience and Bioengineering, 115(2), 196-199

  29. Ninomiya, K., Arakawa, M., Ogino, C., Shimizu, N. (2013) Inactivation of Escherichia coli by sonoelectrocatalytic disinfection using TiO2 as electrode., Ultrasonics Sonochemistry, 20(2), 762-767

  30. Ninomiya, K., Kaneda, K., Kawashima, S., Miyachi, Y., Ogino, C., Shimizu, N. (2013) Cell-SELEX based selection and characterization of DNA apatamer recognizing human hepatocarcinoma., Bioorganic & Medicinal Chemistry, 23(6), 1797-1802

  31. Srivastava, S.K., Yamada, R., Ogino, C., Kondo, A. (2013) Sidewall modification of multiwalled carbon nanotubes by Allivum sativum (garlic) and its effect on the deposition of gold nanoparticles., Carbon, 56, 309-316

  32. Tanaka, T., Matsumoto, S., Yamada, M., Yamada, R., Matsuda, F., Kondo, A. (2013) Display of active beta-glucosidase on the surface of Schizosaccharomyces pombe cells using novel anchor proteins., Applied Microbiology and Biotechnology, 97(10), 4343-4352

  33. Kawai, Y., Noda, S., Ogino, C., Takeshima, Y., Okai, N., Tanaka, T., Kondo, A. (2013) p-Hydroxycinnamic acid production directly from cellulose using endoglucanase- and tyrosine ammonia lyase-expressing Streptomyces lividans., Microbial Cell Factories, 12(1), 45

  34. Joseph, A., Aikawa, S., Sasaki, K., Tsuge, Y., Matsuda, F., Tanaka, T., Kondo, A. (2013) Utilization of lactic acid bacterial genes in Synechocystis sp. PCC 6803 for the production of lactic acid., Bioscience, Biotechnology, and Biochemistry, 77(5), 966-970

  35. Noda, S., Kawai, Y., Miyazaki, T., Tanaka, T., Kondo, A. (2013) Creation of endoglucanase-secreting Streptomyces lividans for enzyme production using cellulose as the carbon source., Applied Microbiology and Biotechnology, 97(13), 5711-5720

  36. Izumi, Y., Aikawa, S., Matsuda, F., Hasunuma, T., Kondo, A. (2013) Aqueous size-exclusion chromatographic method for the quantification of cyanobacterial native glycogen., Journal of Chromatography B, 930, 90-97

  37. Tanimura, K., Nakayama, H., Tanaka, T., Kondo, A. (2013) Ectoine production from lignocellulosic biomass-derived sugars by engineered Halomonas elongata., Bioresource Technology, 142, 523-529

  38. Nakamura, Y., Ishii, J., Kondo, A. (2013) Rapid, facile detection of heterodimer partners for target human G-protein-coupled receptors using a modified split-ubiquitin membrane yeast two-hybrid system., PLoS ONE, 8(6), e66793

  39. Ho, S-H., Kondo, A., Hasunuma, T., Chang, J-S. (2013) Engineering strategies for improving the CO2 fixation and carbohydrate productivity of Scenedesmus obliquus CNW-N used for bioethanol fermentation., Bioresource Technology, 143, 163-171

  40. Hong, W.K., Heo, S.Y., Park, H.M., Kim, C.H., Sohn, J.H., Kondo, A., Seo, J.W. (2013) Characterization of a squalene synthase from the thraustochytrid microalga Aurantiochytrium sp. KRS101., Journal of Microbiology and Biotechnology,23(6), 759-765

  41. Mori, A., Ozasa, S., Noda, S., Tanaka, T., Ichinose, H., Kamiya, N. (2013) Aligning an endoglucanase Cel5A from Thermobifida fusca on a DNA scaffold : potent design of an artificial cellulosome., Chemical Communications, 49(62), 6971-6973

  42. Hong, WK., Yu, A., Heo, SY., Oh, BR., Kim, CH., Sohn, JH., Yang, JW., Kondo, A., Seo, JW. (2013) Production of lipids containing high levels of docosahexaenoic acid from empty palm fruit bunches by Aurantiochytrium sp. KRS101., Bioprocess and Biosystems Engineering, 36(7), 959-963

  43. Matsuda, F., Shirai, T., Ishii, J., Kondo, A. (2013) Regulation of central carbon metabolism in Saccharomyces cerevisiae by metabolic inhibitors., Journal of Bioscience and Bioengineering, 116(1), 59-64

  44. Noda, S., Miyazaki, T., Tanaka, T., Ogino, C., Kondo, A. (2013) High-level production of mature active-form Streptomyces mobaraensis transglutaminase via pro-transglutaminase processing using Streptomyces lividans as a host., Biochemical Engineering Journal, 74, 76-80

  45. Aikawa, S., Joseph, A., Yamada, R., Izumi, Y., Yamagishi, T., Matsuda, F., Kawai, H., Chang, JS., Hasunuma, T., Kondo, A. (2013) Direct conversion of Spirulina to ethanol without pretreatment or enzymatic hydrolysis processes., Energy & Environmental Science, 6(6), 1844-1849　

  46. Hasunuma, T., Kikuyama, F., Matsuda, M., Aikawa, S., Izumi, Y., Kondo, A. (2013) Dynamic metabolic profiling of cyanobacterial glycogen biosynthesis under conditions of nitrate depletion., Journal of Experimental Botany, 64(10), 2943-2954

  47. Yamada, R., Nakatani, Y., Ogino, C., Kondo, A. (2013) Efficient direct ethanol production from cellulose by cellulase- and cellodextrin transporter-co-expressing Saccharomyces cerevisiaee., AMB Express, 3, 34

  48. Nishimura, Y., Mieda, H., Ishii, J., Ogino, C., Fujiwara, T., Kondo, A. (2013) Targeting cancer cell-specific RNA interference by siRNA delivery using a complex carrier of affibody-displaying bio-nanocapsules and liposomes., Journal of Nanobiotechnology, 11, 19

  49. Nakatani, Y., Yamada, R., Ogino, C., Kondo, A. (2013) Synergetic effect of yeast cell-surface expression of cellulase and expansin-like protein on direct ethanol production from cellulose., Microbial Cell Factories, 12(1), 66

  50. Yamamoto, K., Matsumoto, T., Shimada, S., Tanaka, T., Kondo, A. (2013) Starchy biomass-powered enzymatic biofuel cell based on amylases and glucose oxidase multi-immobilized bioanode., New Biotechnology, 30(5), 531-535

  51. Okazaki, F., Nakashima, N., Ogino, C., Kondo, A. (2013) Biochemical characterization of a thermostable β-1, 3-xylanase from the hyperthermophilic eubacterium, Thermotoga neapolitana strain DSM 4359., Applied Microbiology and Biotechnology, 97(15), 6749-6757

  52. Kato, H., Matsuda, F., Yamada, R., Nagata, K., Shirai, T., Hasunuma, T., Kondo, A. (2013)Cocktail δ-integration of xylose assimilation genes for efficient ethanol production from xylose in Saccharomyces cerevisiae., Journal of Bioscience and Bioengineering, 116(3), 333-336

  53. Ninomiya, K., Ogino, C., Kawabata, S., Kitamura, K., Maki, T., Hasegawa, H., Shimizu, N. (2013) Ultrasonic inactivation of Microcystis aeruginosa in the presence of TiO2 particles, Journal of Bioscience and Bioenginnering, 116(2), 214-218

  54. Yamashita, Y., Yamaoka, M., Hasunuma, T., Ashida, H., Yoshida, K. (2013) Detection of orally administered inositol stereoisomers in mouse blood plasma and their effects on translocation of glucose transporter 4 in skeletal muscle cells., Journal of Agricultural and Food Chemistry, 61(20), 4850-4854

  55. Adachi, N., Takahashi, C., Murota, N., Yamaguchi, R., Tanaka, T., Kondo, A. (2013) Direct L-lysine production from cellobiose by Corynebacterium glutamicum displaying beta-glucosidase on its cell surface., Applied Microbiology and Biotechnology, 97(16), 7165-7172

  56. Kiriyama, K., Hara, K.Y., Kondo, A. (2013) Oxidized glutathione fermentation using Saccharomyces cerevisiae engineered for glutathione metabolism., Applied Microbiology and Biotechnology, 97(16), 7399-7404

  57. Ismail, K.S.K., Sakamoto, T., Hasunuma, T., Kondo, A. (2013) Time-based comparative transcriptomics in engineered xylose-utilizing Saccharomyces cerevisiae identifies temperature-responsive genes during ethanol production., Journal of Industrial Microbiology Biotechnology, 40(9), 1039-1050

  58. Yamada, R., Hasunuma, T., Kondo, A. (Review) (2013) Endowing non-cellulolytic microorganisms with cellulolytic activity aiming for consolidated bioprocessing., Biotechnology Advances, 31(6), 754-763

  59. Hong, WK., Heo, SY., Oh, BR., Kim, CH., Sohn, JH., Yang, JW., Kondo, A., Seo, JW. (2013) A transgene expression system for the marine microalgae Aurantiochytrium sp. KRS101 using a mutant allele of the gene encoding ribosomal protein L44 as a selectable transformation marker for cycloheximide resistance., Bioprocess and Biosystems Engineering, 36(9), 1191-1197

  60. Sasaki, K., Sasaki, D., Sakihama, Y., Teramura, H., Yamada, R., Hasunuma, T., Ogino, C., Kondo, A. (2013) Ethanol fermentation by xylose-assimilating Saccharomyces cerevisiae using sugars in a rice straw liquid hydrolysate concentrated by nanofiltration., Bioresource Technology, 147, 84-88

  61. Srivastava, S.K., Hasegawa, T., Yamada, R., Ogino, C., Mizuhata, M., Kondo, A. (2013) Green synthesis of Au, Pd and Au@Pd core-shell nanoparticles via a tryptophan induced supramolecular interface., RSC Advances, 3(40), 18367-18372

  62. Teramura, H., Oshima, T., Matsuda, F., Sasaki, K., Ogino, C., Yamasaki, M., Kondo, A. (2013) Glucose content in the liquid hydrolysate after dilute acid pretreatment is affected by the starch content in rice straw., Bioresource Technology, 149, 520-524

  63. Miyazaki, T., Noda, S., Tanaka, T., Kondo, A. (2013) Hyper secretion of Thermobifida fusca β-glucosidase via a Tat-dependent signal peptide using Streptomyces lividans., Microbial Cell Factories, 12(1), 88

  64. Akimoto, S., Yokono, M., Aikawa, S., Kondo, A. (2013) Modification of energy-transfer processes in the cyanobacterium, Arthrospira platensis, to adapt to light conditions, probed by time-resolved fluorescence spectroscopy., Photosynthesis Research, 117(1-3), 235-243

  65. Ikeda, N., Miyamoto, M., Adachi, N., Nakano, M., Tanaka, T., Kondo, A. (2013) Direct cadaverine production from cellobiose using beta-glucosidase displaying Escherichia coli., AMB Express, 3(1), 67

  66. Arba, M., Aikawa, S., Niki, K., Yokono, M., Kondo, A., Akimoto, S. (2013) Differences in excitation energy transfer of arthrospira platensis cells grown in seawater medium and freshwater medium, probed by time-resolved fluorescence spectroscopy., Chemical Physics Letters, 588, 231-236

  67. Hwang, S.Y., Nakashima, K., Okai, N., Okazaki, F., Miyake, M., Hanazono, K., Ogino, C., Kondo, A. (2013）Thermal stability and starch degradation profile of α-amylase from Streptomyces avermitilis., Bioscience, Biotechnlolgy, and Biochemistry, 77(12), 2449-2453

  68. Zhang, F., Adachi, D., Tamalampudi, S., Kondo, A., Tominaga, K. (2013) Real-Time Monitoring of the Transesterification of Soybean Oil and Methanol by Fourier-Transform Infrared Spectroscopy., Energy & Fuels, 27, 5957-5961

  69. Nakatsui, M., Araki, M., Kondo, A. (2013) An approach for dynamical network reconstruction of simple network motifs., BMC System Biology , 7(suppl 6):54

  70. Nakamura, Y., Ishii, J., Kondo, A. (2013) Bright fluorescence monitoring system utilizing Zoanthus sp. green fluorescent protein (ZsGreen) for human G-protein-coupled receptor signaling in microbial yeast cells., PLoS ONE, 8(12) e82237

  71. Matsuda, F., Ishii, J., Kondo, T., Ida, K., Tezuka, H,. Kondo, A. (2013) Increased isobutanol production in Saccharomyces cerevisiae by eliminating competing pathways and resolving cofactor imbalance., Microbial Cell Factories, 12:119

  72. Tsuge, Y., Tateno, T., Sasaki, K., Hasunuma, T., Tanaka, T., Kondo, A. (2013) Direct production of organic acids from starch by cell surface engineered Corynebacterium glutamicum in anaerobic conditions., AMB Express,3(1):72

  73. Matsumoto, T., Shimada, S., Yamamoto, K., Tanaka, T., Kondo, A. (2013) Two-stage oxidation of glucose by an enzymatic bioanode., Fuel Cells, 13(6), 960-964

  74. Tan, Z., Sato, K., Takami, S., Numako, C., Umetsu, M., Soga, K., Nakayama, M., Sasaki, R., Tanaka, T., Ogino, C., Kondo, A., Yamamoto, K., Hashishin, T., Ohara, S. (2013) Particle size for photocatalytic activity of anatase TiO2 nanosheets with highly exposed {001} facets., RSC Advances, 3, 19268-19271

  75. Sasaki, K., Morita, M., Sasaki, D., Ohmura, N., Igarashi, Y. (2013) The membraneless bioelectrochemical reactor stimulates hydrogen fermentation by inhibiting methanogenic archaea., Applied Microbiology and Biotechnology, 97(15), 7005-7013

総説・解説

  1. 荻野千秋,　山田亮祐,　近藤昭彦,　イオン液体前処理バイオマスを用いたエタノール同時糖化発酵, 化学工業,　Vol.64（2）, 52-55 (2013)

  2. 岡井直子，近藤昭彦，バイオマスプラスチックとバイオリファイナリー，配管技術，739. Vol.55. No.7, 30-35 (2013)

  3. 石井純，蓮沼誠久，松田史生, 近藤昭彦,　革新的なものづくり実現のための「合成生物工学」，生物工学会誌，91(6), 314-318 (2013)

  4. 佐々木建吾,　佐々木大介,　森田仁彦,　五十嵐泰夫,　近藤昭彦,　電気化学システムを用いた模擬生ごみからの水素発酵の制御,　水素エネルギーシステム,　Vol.38, No.1, 33-37 (2013)

  5. 石井純，蓮沼誠久，松田史生, 近藤昭彦,　バイオリファイナリー社会に向けた燃料・化学品生産, 安全工学,　Vol.52, No.4, 249-255 (2013)

著書

  1. 近藤昭彦,　松田史生,　生命システム工学,　８章,　システムズ代謝工学および細胞表層工学による微生物工場開発,　化学同人,　147-176 (2013)

  2. 蓮沼誠久，荻野千秋，近藤昭彦，リサイクルバイオテクノロジーの最前線，第I編 第1章，未来型CBP法によるバイオエタノール生産技術の展開，シーエムシー出版，1-9 (2013)

  3. 蓮沼誠久，リサイクルバイオテクノロジーの最前線，第I編 第1章，微細藻類・シアノバクテリアからのバイオエタノール生産，シーエムシー出版，57-65 (2013)

  4. 荻野千秋,　基礎から学ぶ生物化学工学演習,　1.2節 生化学の基礎, 3.2節 酵素反応における反応速度論, コロナ社，7-16, 53-62 (2013)

  5. 蓮沼誠久，近藤昭彦,　次世代パワートレイン開発と燃料技術,　第３編 第５章 3 ,　次世代バイオエタノール製造技術,　シーエムシー出版，　184-193 (2013)