村上研究室website

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＞＞主な業績

●和文総説・解説

植物学の百科事典 p.492-493『藍藻』／丸善出版（2016）

光と生命の事典口絵6『藻類から分離した代表的な光合成色素』, p.82-83『補色順化』／朝倉書店（2016）

光合成事典（Web版）編集委員・執筆者／日本光合成学会（2015年4月公開）

村上明男（2013）「電子授受反応を主導する光合成色素」生物工学会誌 91:376-380 藻類ハンドブック p.238-242『フィコビリン』／(株)NTS （2012）

村上明男 (2012)「色素がとりもつ光と海の生物」談話室、生物工学会誌 90:264-265
　
村上明男（2010）水と光を操る光合成生物—藻類—　日本海水学会誌　64：268-274.
　
村上明男 (2009)「光化学系反応中心の分光学的定量（３章単離・精製・活性測定 3.酵素・電子伝達成分の精製・活性測定・定量 h.）「光合成研究法（低温科学，第67巻）」，北海道大学低温科学研究所・日本光合成研究会共編 pp.259-263,北海道大学低温科学研究所
　
村上明男・小檜山篤志 (2009)「藻類（１章植物・藻類・細菌の材料の入手と栽培・培養 9.）」「光合成研究法（低温科学，第67巻）」北海道大学低温科学研究所・日本光合成研究会共編 pp.53-59，北海道大学低温科学研究所
　
三村徹郎・村上明男 (2009)「水生植物の生理」In: 水環境の今と未来（藻類と植物のできること），神戸大学水圏光合成生物研究グループ編，pp.35-50，生物研究社
　
窪川かおる・村上明男（2009）ナメクジウオの緑色蛍光タンパク質「細胞工学」28:70-75
　
村上明男（2006）藻類　光合成微生物の機能と応用　（第２章光合成微生物の基礎　４項）シーエムシー出版　pp.116-125.
　
三室守・村上明男（2006）クロロフィルd生物の寄与を考慮した海洋の生産性「月刊海洋」 38:399-407
　
村上明男・宮下英明・三室守 (2004) 紅藻のクロロフィルdの謎－着生シアノバクテリアが真の生産者－「遺伝」58:82-87、裳華房.
　
光合成事典分担執筆（10項目）／学会出版センター（2003）

　
●原著論文・総説

Arai S, Hayashihara K, Kanamoto Y, Shimizu K, Hirokawa Y, Hanai T, Murakami A and Honda H (2017) Alcohol-Tolerant Mutants of Cyanobacterium Synechococcus elongatus Pcc 7942 Obtained by Single-Cell Mutant Screening System. Biotechnology and Bioengineering 114(8):1771-1778.
　
Atsushi Takabayashi, Saeka Takabayashi, Kaori Takahashi, Mai Watanabe, Hiroko Uchida, Akio Murakami, Tomomichi Fujita, Masahiko Ikeuchi and Ayumi Tanaka (2017) PCoM-DB Update: A Protein Co-Migration Database for Photosynthetic Organisms. Plant and Cell Physiology, 58 : e10. DOI:https://doi.org/10.1093/pcp/pcw219
　
Jayvee Ablaña Saco, Akio Murakami, Satoko Sekida and Ichiro Mine (2017) Chloroplast position and photosynthetic characteristics in two monostromatic species, Monostroma angicava and Protomonostroma undulatum (Ulvophyceae), having a shared ecological niche. Phycological Research (in press)
　
Takaichi S., Yokoyama A, Mochimaru M, Uchida H and Murakami A (2016) Carotenogenesis Diversification in Phylogenetic Lineages of Rhodophyta. Journal of Phycology 52:329-338. DOI: 10.1111/jpy.12411
　
Tanaka K, Iida S, Takaichi S, Mimuro M, Murakami A and Akimoto S (2016) Excitation relaxation dynamics and energy transfer in pigment–protein complexes of a dinoflagellate revealed by ultrafast fluorescence spectroscopy. Photosynthesis Research 130:183-191. DOI: 10.1007/s11120-016-0238-x
　
Hamada F, Murakami A and Akimoto S (2015) Comparative analysis of ultrafast excitation energy-transfer pathways in three strains of divinyl chlorophyll a/b‑containing cyanobacterium, Prochlorococcus marinus. Journal of Physical Chemistry B. 119: 15593–15600. (DOI: 10.1021/acs.jpcb.5b10073)
　
Shin-ichi Maeda, Akio Murakami, Hisashi Ito, Ayumi Tanaka, Tatsuo Omata (2015) Functional characterization of the FNT family nitrite transporter of marine picocyanobacteria. Life 5, 432-446; (doi:10.3390/life5010432)
　
Rio Yamanaka, Kaoru Nakamura, Masahiko Murakami, Akio Murakami (2015) Selective synthesis of cinnamyl alcohol by cyanobacterial photobiocatalysts. Tetrahedron Letters 56:1089-1091. (doi:10.1016/j.tetlet.2015.01.092)
　
Yoshida N, Iguchi H, Yurimoto H, Murakami A, Sakai Y (2014) Aquatic plant surface as a niche for methanotrophs. Frontiers in Microbiology / Terrestrial Microbiology 5:30 (pp.9), (doi: 10.3389/fmicb.2014.00030)
　
Takaichi S, Mochimaru M, Uchida H, Murakami A, Hirose E, Maoka T, Tsuchiya T and Mimuro M (2012) Opposite chilarity of a-carotene in unusual cyanobacteria with unique chlorophylls, Acaryochloris and Prochlorococcus. Plant and Cell Physiology 53:1881-1888. doi:10.1093/pcp/pcs126
　
Hamada F, Yokono M, Hirose E, Murakami A, Akimoto S (2012) Excitation energy relaxation in a symbiotic cyanobacterium, Prochloron didemni, occurring in coral-reef ascidians, and in a free-living cyanobacterium, Prochlorothrix hollandica. Biochimica et Biophysica Acta 1817:1992-1997. (doi:10.1016/j.bbabio.2012.06.008).
　
Yamanaka R, Nakamura K, Murakami A (2011) Reduction of exogenous ketones depends upon NADPH generated photosynthetically in cells of the cyanobacterium Synechococcus PCC 7942. AMB Express 2011, 1:24. (doi:10.1186/2191-0855-1-24)
　
Yokono M, Murakami A, Akimoto S (2011) Excitation energy transfer between photosystem II and photosystem I in red algae: Larger amounts of phycobilisome enhance spillover. Biochimica et Biophysica Acta 1807:847-853. (doi:10.1016/j.bbabio.2011.03.014)
　
Mimuro M, Murakami A, Tomo T, Tsuchiya T, Watabe K, Yokono M, Akimoto S (2011) Molecular environments of divinyl chlorophylls in Prochlorococcus and Synechocystis: Differences in fluorescence properties with chlorophyll replacement. Biochimica et Biophysica Acta 1807:471–481. (doi:10.1016/j.bbabio.2011.02.011)
　
Hirose Y and Murakami A (2011) Microscopic anatomy and pigment characterization of coral-encrusting black sponge with cyanobacterial symbiont, Terpios hoshinota. Zoological Science 28:199-205. (DOI: 10.2108/zsj.28.199)
　
佐藤崇範・小俣珠乃・鈴木淳・蓑島佳代・能丸恵理子・村上明男・村山昌平・川幡穂高・丸山正(2010)ハマサンゴの光制御下での長期飼育実験－骨格炭素同位体比と共生藻光合成の相関解析－, JAMSTEC Report of Research and Development 11:43-58. (with cover photo)
　
植木知佳・村上明男・嵯峨直恆・加藤敏朗・本村泰三, 2010「紅藻スサビノリの光合成色素と葉緑体微細構造における栄養欠乏応答」日本水産学会誌 76:375-382
　
Matsunaga S, Uchida H, Iseki M, Watanabe M and Murakami A (2010) Flagellar motions in phototactic steering in a brown algal swarmer. Photochemistry Photobiology 86:374-381.
　
Iida S, Kobiyama A, Ogata T and Murakami A (2009) Identification of transcribed and persistent variants of the psbA gene carried by plastid minicircles in a dinoflagellate. Current Genetics 55:583-591.
　
Hirose E, Neilan BA, Schmidt EW, Murakami A (2009) Enigmatic life and evolution of Prochloron and related cyanobacteria inhabiting colonial ascidians. In Handbook on Cyanobacteria: Biochemistry, Biotechnology and Applications (ed. PM Gault & HJ Marler), Nova Science Publishers. pp.161-189.
　
Hirose Y, Uchida H and Murakami A (2009) Ultrastructural and microspectrophotometric characterization of multiple species of cyanobacterial photosymbionts coexisting in the colonial ascidian Trididemnum clinides (Tunicata, Ascidiacea, Didemnidae) European Journal of Phycology 44:365-375.
　
Iida S, Kobiyama, A, Ogata, T and Murakami A (2008) The D1 and D2 proteins of dinoflagellates: unusually accumulated mutations which influence on PSII photoreaction. Photosynthesis Research 98: 415-425.
　
Mimuro M, Kobayashi M, Murakami A, Tsuchiya T and Miyashita H (2008) Structure and function of antenna systems: Oxygen evolving cyanobacteria, In Primary Processes of Photosynthesis" (ed. Renger G), pp.261-299, RSC Publishing, Cambridge, UK.
　
Murakami A, Miyashita H, Iseki M, Adachi K and Mimuro M (2004) Chlorophyll d in an epiphytic cyanobacterium of red algae. Science 303: 1633.
　
Iseki M, Matsunaga S, Murakami A, Ohno K, Shiga K, Yoshida K, Sugai M, Takahashi T, Hori T and Watanabe M (2002) A blue-light activated adenylyl cyclase mediates photoavoidance in Euglena gracilis. Nature 415: 1047-1051.