Publication List of the Chromosome Link,
Dec. 1999 - Nov. 2000

Season's Greetings from CL

PDF version of the list

ORIGINAL PAPERS

Abbasi, F. M., Brar, D. S., Carpena, A. L., Fukui, K., Khush, G. S. (1998) Characterization of parental chromosomes in anther culture derived plant from Oryza sativa L. x O. australiensis Domin through genomic in situ hybridization. Rice Genet. Newsl. 15: 84.

Abbasi, F. M., Brar D. S., Carpena A. L., Fukui K., Khush G. S. (1999) Detection of autosyndetic and allosyndetic pairing among A and E genomes of Oryza through genomic in situ hybridization. Rice Genet. Newsl. 16: 24-25.

Sone, T., Fujisawa, M., Takenaka, M., Nakagawa, S., Yamaoka, S., Sakaida, M., Nishiyama, R., Yamato, K. T., Ohmido, N., Fukui, K., Fukuzawa, H., Ohyama, K. (1999) Bryophyte 5S rDNA was inserted into 45S rDNA repeat units after the divergence from higher land plants. Plant Mol. Biol. 41: 679-685.

Matsuyama, T., Akihama, T., Ito, Y., Omura, M., and Fukui, K. (1999) Distribution of TGG repeat-related sequences in 'Trovita' orange (Citrus sinensis Osbeck) chromosome. Genome 42: 1251-1254.

Yamamoto, T., Shiraki, K., Fujiwara, S., Takagi, M., Fukui, K., Imanaka, T. (1999) In vitro heat effect on functional and conformational changes of cyclodextrin glucanotransferase from hyperthermophilic archaea. Biochem. Biophys. Res. Commun. 265: 57-61.

Ito, M., Ohmido, N., Akiyama, Y., Fukui, K., Koba, T. (2000) Characterization of spinach chromosomes by condensation patterns and physical mapping of 5S and 45S rDNAs by FISH. J. Amer. Soc. Hort. Sci. 125: 59-62.

Yamamoto, T., Fujiwara, S., Tachibana, Y., Takagi, M., Fukui, K., Imanaka, T. (2000) Alteration of product specificity of cyclodextrin glucanotransferase from Thermococcus sp. B1001 by site directed mutagenesis. J. Biosci. Bioeng. 89: 206-209.

Higashibata, H., Fujiwara, S., Takagi, M., Fukui, K., Imanaka, T. (2000) Effect of polyamines on histone-induced DNA compaction of hyperthermophilic archaea. J. Biosci. Bioeng. 89: 103-106.

Ohmido, N., Kijima, K., Akiyama, Y., de Jong, J. H., Fukui, K. (2000) Quantification of total genomic DNA and selected repetitive sequences reveals concurrent changes in different DNA families in indica and japonica rice. Mol. Gen. Genet. 263: 388-394.

Shishido, R., Sano, Y., Fukui, K. (2000) Ribosomal DNAs: an exception to the conservation of gene order in rice genomes. Mol. Gen. Genet. 263: 586-591.

Seo, S., Okamoto, M., Iwai, T., Iwano, M., Fukui, K., Isogai, A., Nakajima, N., Ohashi, Y. (2000) Reduced level of chloroplast FtsH protein in tobacco mosaic virus-infected tobacco leaves accelerate the hypersensitive reaction. Plant Cell 12: 917-932.

Ito, M., Ohmido, N., Akiyama, Y., Fukui, K. (2000) Quantitative chromosome map of Arabidopsis thaliana L. by imaging methods. Cytologia 65: 325-331.

Nishiyama, R., Yamato, K. T., Miura, K., Sakaida, M., Okada, S., Kono, K., Takahama, M., Sone, T., Takenaka, M., Fukuzawa, H., Ohyama, K. (2000) Comparison of expressed sequence tags from male and female sexual organs of Marchantia polymorpha. DNA Res. 7: 165-174.

Apisitwanich, S., Shishido, R., Akiyama, Y., Fukui, K. (2000) Quantitative chromosome map of a representative indica rice. Euphytica 116: 161-166.

Okada, S., Fujisawa, M., Sone, T., Nakayama, S., Nishiyama, R., Takenaka, M., Yamaoka, S., Sakaida, M., Kono, K., Takahama, M., Yamato, K. T., Fukuzawa, H., Brennicke, A., Ohyama, K. (2000) A Y-specific clone from sex-specific genomic PAC-libraries of the dioecious liverwort, Marchantia polymorpha. Plant J. 24: 421-428.

Ito, M., Miyamoto, J., Mori, Y., Fujimoto, S., Uchiumi, T., Abe, M., Suzuki, A., Tabata, S. Fukui, K. (2001) Determination of genome and of chromosomes dimensions of Lotuc japonicus. J. Plant Res. (in press).

Kitamura, S., Inoue M., Ohmido N., Fukui K. (2000) Quantitative chromosome maps and rDNA localization in T subgenome of Nicotiana tabacum L. and its putative progenitors. Theor. Appl. Genet. (in press).

Jeon, S-J., Fujiwara, S., Takagi, M., Fukui, K., Imanaka, T.: Unique nucleoid structure during cell division of Thermococcus kodakaraenensis KOD1. J. Biosci. Bioeng. (in press).

Kumekawa, N., Ohmido, N., Fukui, K., Ohtsubo, H., Ohtsubo, E. : A new gypsy-type retrotransposon RIRE7: Preferential insertion into the tandem repeat sequence TrsD in the pericentromic heterochromatin regions of rice chromosomes. Mol. Gen. Genet.(accepted).

Iwano, M., Ogasawara, Y., Hase, A., Nakamura, H., Yokomura, E., Nakajima, Y., Fukui, K., Isogai, A.: The assembly of plasmid DNA and chromatophore in Rhodospirillum rubrum. Protoplasma (accepted).

Sykorova, E., Fajkus, J., Ito, M., Fukui, K.: Transition between two forms of heterochromatin at plant subtelomeres. Chromosome Res. (accepted).


REVIEWS

Fukui, K. (1999) Multi-dimensional visualization of plant genomes. J. Electr. Microsc. Tech. Med. Biol. 14: 9-11 (in Japanese).

Ohmido. N., Fukui, K. (1999) FISH method visualizes DNA and genes on chromosomes and genomes. BRAIN Techno News 72: 16-18 (in Japanese).

Fukui, K., Ohmido, N. (2000) Visual detection of useful genes on plant chromosomes. Jpn. Agr. Res. Quart. 34: 153-158.

Ito, M., Fukui, K. (2000) Identification of Arabidopsis chromosomes. In: "Cell division in plants" Plant Cell Technology series 13 (Eds. Machida, Y., Fukuda, H.) Shujunsha Co., Ltd., Tokyo, pp.135-137 (in Japanese).

Fukui, K. (2000) Recent advances in visualization technologies. Biosci. Biotech. 38: 182-188 (in Japanese).

Ohmido, N. (2000) Visualization of DNA sequences and gene by multi colorzation. Biosci. Biotech. 38: 380-386 (in Japanese).

Wako, T., Shimogawara-Furushima, R. (2000) Visualization of three dimensional cell structure. Biosci. Biotech. 38: 462-466 (in Japanese).

Akiyama, Y., Kato, S (2000) Recent advances in image analyzing method. Biosci. Biotech. 38: 466-471 (in Japanese).

Ohmido, N., Fukui, K. (2000) Advanced development of visualization techniques for plant genome. In: "Genome science protocols in plants" Plant Cell Technology series 14 (Eds. Shimamoto, K., Sasaki, T., Tabata, T.) Shujunsha Co., Ltd., Tokyo (in press) (in Japanese).

Shishido, R., Ohmido, N., Fukui, K. Chromosome painting as a tool for rice genetics and breeding. Methods in Cell Science (accepted).


BOOKS

Ohmido, N., Fukui, K. (1996) Fluorescence in situ hybridization, In: Rice Breeding Manual (Eds. Yamamoto, R., Horisue, N., Ikeda, R.), Yokendo Co. Ltd., Tokyo. pp.218-226 (in Japanese).

Fukui, K., Ohmido, N. (2000) Rice genome research: an alternative approach based on molecular cytology. In: Genomes (Ed. Gustafson, J. P.), Kluwer Academic / Plenum Publishers, New York, pp.109-121.

Fukui, K., Ohmido, N., Wako, T. (2000) Smallness: gain and loss in plant chromosome research. In: Chromosome Today Vol. 13. (Eds. Olmo, E. Redi, C. A.) Birkhauser Verlag AG., Switzerland, pp.287-301.

Nakayama, S., Fukui, K. Recent advances in plant chromosome sciences toward the next millennium. In: New Advances in Crop Engineering for 21st Century, (Ed. Siddiqui, K. A.) (in press).