メンバー紹介

PD崎濱 由梨 Yuri Sakihama

経歴

2000/03
東洋大学 工学部 応用化学科 卒業
2002/03
東洋大学大学院 工学研究科 応用化学専攻 博士前期 修了
2005/03
東京工業大学大学院 生命理工学研究科 生物プロセス専攻 博士後期 修了
2005/04
東京工業大学大学院 生命理工学研究科 特別研究員
2005/05
(独)科学技術振興機構 プレベンチャー「希土類錯体チーム」博士研究員
2006/09
立命館大学 博士研究員
2007/09
協和発酵キリン(株) 博士研究員
2011/06
神戸大学大学院 工学研究科 学術研究員
2013/03
高機能遺伝子デザイン技術研究組合 研究員
2016/12
神戸大学大学院 科学技術イノベーション研究科 学術研究員

発表論文

  1. Nambu-Nishida, Y., Sakihama, Y., Ishii, J., Hasunuma, T., Kondo, A. (2018) Selection of yeast Saccharomyces cerevisiae promoters available for xylose cultivation and fermentation, Journal of Bioscience and Bioengineering, 125(1), 76-86
  2. Sakihama, Y., Hasunuma, T., Kondo, A. (2015) Improved ethanol production from xylose in the presence of acetic acid by the overexpression of the HAA1 gene in Saccharomyces cerevisiae., Journal of Bioscience and Bioengineering, 119(3), 297-302
  3. Sasaki, K., Tsuge, Y., Sasaki, D., Hasunuma, T., Sakamoto, T., Sakihama, Y., Ogino, C., Kondo, A. (2014) Optimized membrane process to increase hemicellulosic ethanol production from pretreated rice straw by recombinant xylose-fermenting Saccharomyces cerevisiae., Bioresource Technology, 169, 380-386
  4. Sasaki, K., Sasaki, D., Sakihama, Y., Teramura, H., Yamada, R., Hasunuma, T., Ogino, C., Kondo, A. (2013) Ethanol fermentation by xylose-assimilating Saccharomyces cerevisiae using sugars in a rice straw liquid hydrolysate concentrated by nanofiltration., Bioresource Technology, 147, 84-88
  5. Sakihama, Y., Mizoguchi, H., Oshima, T., Ogasawara, N. (2012) YdfH identified as a repressor of rspA by the use of reduced genome Escherichia coli MGF-01., Bioscience, Biotechnology, and Biochemistry, 76(9), 1688-1693
  6. Xie, MJ., Fukui, K., Horie, M., Sakihama, Y., Hashino, K., Kimura, H., Matsumoto, K. (2008) A novel sensitive immunoassay method based on the Invader technique. Analytical Biochemistry, 15;374(2), 278-284
  7. Horie, M., Fukui, K., Xie, M., Kageyama, Y., Hamada, K., Sakihama, Y., Sugimori, K., Matsumoto, K. (2007) The N-terminal region is important for the nuclease activity and thermostability of the flap endonuclease-1 from Sulfolobus tokodaii. Bioscience, biotechnology, and biochemistry, 71(4), 855-865
  8. Sakihama, Y., Adachi, W., Shimizu, S., Sunami, T., Fukazawa, T., Suzuki, M., Yatsunami, R., Nakamura, S., Takénaka, A. (2004) Crystallization and preliminary X-ray analyses of the active and the inactive forms of family GH-8 chitosanase with subclass II specificity from Bacillus sp. strain K17. Acta Crystallographica Section D Biological Crystallography, 60(Pt 11), 2081-3
  9. Adachi, W., Sakihama, Y., Shimizu, S., Sunami, T., Fukazawa, T., Suzuki, M., Yatsunami, R., Nakamura, S., Takénaka, A. (2004) Crystal structure of family GH-8 chitosanase with subclass II specificity from Bacillus sp. K17. Journal of Molecular Biology, 22;343(3), 785-795
  10. Yatsunami, R., Sakihama, Y., Suzuki, M., Fukazawa, T., Shimizu, S., Sunami, T., Endo, K., Takénaka, A., Nakamura, S. (2002) A novel chitosanase from Bacillus sp. strain K17. gene cloning and expression in Escherichia coli. Nucleic Acids Res Suppl, (2), 227-228
  11. Takai, K., Hirayama, H., Sakihama, Y., Inagaki, F., Yamato, Y., Horikoshi, K. (2002) Isolation and metabolic characteristics of previously uncultured members of the order aquificales in a subsurface gold mine. Applied and Environmental Microbiology, 68(6), 3046-3054
  12. Inagaki, F., Sakihama, Y., Inoue, A., Kato, C., Horikoshi, K. (2002) Molecular phylogenetic analyses of reverse-transcribed bacterial rRNA obtained from deep-sea cold seep sediments. Environmental Microbiology, 4(5), 277-286

総説・解説等

  1. 崎濱由梨, 蓮沼誠久, 近藤昭彦, ひらく、ひらく「バイオの世界」, Part 4, バイオエタノールは地球にやさしいの?, 化学同人, 98-99(2012)
  2. Hatayama, K., Sakihama, Y., Matsumiya, Y., Kubo, M. Construction of an efficient bioremediation system for petroleum hydrocarbon contaminated soils using specific hydrocarbon-degrading bacteria and bacterial biomass monitoring, Soil Contamination Reserch Trends, pp.143-160 (2008)
  3. Sakihama, Y., Toshida, T., Imada, M., Kubota, K., Matsumiya, Y., Kubo, M. Bioremediation of cude oil contaminated soil by alkyl cyclohexane degrading bacterium, Memoirs Institute of Science and Engineering University, Kusatsu, Shiga, Japan. 65, 109-116 (2006)
  4. Takenaka, A., Adachi, W., Sakihama, Y., Shimizu, S., Sunami, T., Fukazawa, T., Suzuki, M., Yatsunami, R., Nakamura, S. Various chitosanases developed from different structural kingdoms, Chitin Chitosan Res., 11, 1-13 (2005)
  5. Sakihama, Y., Suzuki, M., Fukazawa, T., Yatsunami, R., Endo, K., Adachi, W., Shimizu, S., Sumami, T., Takenaka, A., Nakamura, S. A novel chitosanase from Bacillus sp. strain K17: purification, characterization and gene cloning. In "Biotechnology of Lignocelloulse Degradation and Biomass Utilization" (eds. by Ohmiya K. et al.), Uni Publishers, Tokyo, pp. 478-483 (2004)
  6. Yatsunami, R., Sakihama, Y., Suzuki, M., Fukazawa, T., Endo, K., Adachi, W., Shimizu, S., Sumami, T., Takenaka, A., Nakamura, S. A novel chitosanase from Bacillus sp. strain K17: Gene cloning and expression in Escherichia coli. Nucleic Acids Res Suppl, 2, 227-228 (2002)
  7. 稲垣史生, 崎濱由梨, 加藤千明, 井上明, 掘越弘毅, 日本海溝の冷水湧出域堆積物に生息する微生物群集の多様性, 海洋科学技術センター JAMSTEC 深海研究 第20号 (平成14年3月), pp. 29-36 (2002)
  8. 崎濱由梨, 稲垣史生, 高井研, 小松徹史, 井上明, 掘越弘毅, 日本海溝で取得した深海底岩石内の微生物群集変化, 海洋科学技術センター JAMSTEC 深海研究, 第19号 (平成13年10月), pp. 15-22 (2001)